ViralFusionSeq

Summary

ViralFusionSeq (VFS) is a versatile high-throughput sequencing (HTS) tool for discovering viral integration events  and reconstruct fusion transcripts at single-base resolution. VFS combines soft-clipping information, read-pair analysis, and targeted de novo assembly to discover and annotate viral-human fusion events. 

Project

The work was conceived by Jing-Woei Li, with wet-lab support by Nathalie Wong's lab.

Availability

Visit VFS page at SourceForge

Citation

Li, J.W., et al. (2013)ViralFusionSeq: Accurately discover viral integration events and reconstructfusion transcripts at single-base resolution, Bioinformatics.